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Genetic consequences of climate change for northern plants
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Climate change will lead to loss of range for many species, and thus to loss of genetic diversity crucial for their long-term persistence. We analysed range-wide genetic diversity (amplified fragment length poly- morphisms) in 9581 samples from 1200 populations of 27 northern plant species, to assess genetic consequences of range reduction and potential association with species traits. We used species distri- bution modelling (SDM, eight techniques, two global circulation models and two emission scenarios) to predict loss of range and genetic diversity by 2080. Loss of genetic diversity varied considerably among species, and this variation could be explained by dispersal adaptation (up to 57%) and by genetic differentiation among populations (FST; up to 61%). Herbs lacking adaptations for long-distance disper- sal were estimated to lose genetic diversity at higher rate than dwarf shrubs adapted to long-distance dispersal. The expected range reduction in these 27 northern species was larger than reported for tem- perate plants, and all were predicted to lose genetic diversity according to at least one scenario. SDM combined with FST estimates and/or with species trait information thus allows the prediction of species’ vulnerability to climate change, aiding rational prioritization of conservation efforts.
Keywords: conservation genetics; FST; genetic diversity; range reduction; species distribution model; species traits
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How does climate change cause extinction?
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Anthropogenic climate change is predicted to be a major cause of species extinctions in the next 100 years. But what will actually cause these extinctions? For example, will it be limited physiological tolerance to high temperatures, changing biotic interactions or other factors? Here, we systematically review the proximate causes of climate-change related extinctions and their empirical support. We find 136 case studies of climatic impacts that are potentially relevant to this topic. However, only seven ident- ified proximate causes of demonstrated local extinctions due to anthropogenic climate change. Among these seven studies, the proximate causes vary widely. Surprisingly, none show a straightforward relation- ship between local extinction and limited tolerances to high temperature. Instead, many studies implicate species interactions as an important proximate cause, especially decreases in food availability. We find very similar patterns in studies showing decreases in abundance associated with climate change, and in those studies showing impacts of climatic oscillations. Collectively, these results highlight our disturbingly limited knowledge of this crucial issue but also support the idea that changing species interactions are an important cause of documented population declines and extinctions related to climate change. Finally, we briefly outline general research strategies for identifying these proximate causes in future studies.
Keywords: climate change; extinction; physiological tolerances; species interactions
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How the type of anthropogenic change alters the consequences of ecological traps
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Understanding altered ecological and evolutionary dynamics in novel environments is vital for predicting species responses to rapid environmental change. One fundamental concept relevant to such dynamics is the ecological trap, which arises from rapid anthropogenic change and can facilitate extinction. Ecological traps occur when formerly adaptive habitat preferences become maladaptive because the cues individuals preferentially use in selecting habitats lead to lower fitness than other alternatives. While it has been emphasized that traps can arise from different types of anthropogenic change, the resulting consequences of these different types of traps remain unknown. Using a novel model framework that builds upon the Price equation from evolutionary genetics, we provide the first analysis that contrasts the ecological and evolutionary consequences of ecological traps arising from two general types of perturbations known to trigger traps. Our model suggests that traps arising from degradation of existing habitats are more likely to facilitate extinction than those arising from the addition of novel trap habitat. Importantly, our framework reveals the mechanisms of these outcomes and the substantial scope for persistence via rapid evolution that may buffer many populations from extinction, helping to resolve the paradox of continued persistence of many species in dramatically altered landscapes.
Keywords: attractive sink; evolutionary trap; habitat selection; maladaptation; Price equation; rapid evolution
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Genetic change for earlier migration timing in a pink salmon population
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To predict how climate change will influence populations, it is necessary to understand the mechanisms, particularly microevolution and phenotypic plasticity, that allow populations to persist in novel environmental conditions. Although evidence for climate-induced phenotypic change in populations is widespread, evidence documenting that these phenotypic changes are due to microevolution is exceed- ingly rare. In this study, we use 32 years of genetic data (17 complete generations) to determine whether there has been a genetic change towards earlier migration timing in a population of pink salmon that shows phenotypic change; average migration time occurs nearly two weeks earlier than it did 40 years ago. Experimental genetic data support the hypothesis that there has been directional selection for earlier migration timing, resulting in a substantial decrease in the late-migrating phenotype (from more than 30% to less than 10% of the total abundance). From 1983 to 2011, there was a significant decrease—over threefold—in the frequency of a genetic marker for late-migration timing, but there were minimal changes in allele frequencies at other neutral loci. These results demonstrate that there has been rapid microevolution for earlier migration timing in this population. Circadian rhythm genes, however, did not show any evidence for selective changes from 1993 to 2009.
Keywords: microevolution; genetic change; salmon; circadian rhythms; climate change; migration timing
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Disturbance−diversity models: what do they really predict and how are they tested?
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The intermediate disturbance hypothesis (IDH) and the dynamic equilibrium model (DEM) are influential theories in ecology. The IDH predicts large species numbers at intermediate levels of disturbance and the DEM predicts that the effect of disturbance depends on the level of productivity. However, various indices of diversity are considered more commonly than the predicted number of species in tests of the hypotheses. This issue reaches beyond the scientific community as the predictions of the IDH and the DEM are used in the management of national parks and reserves. In order to compare responses with disturbance among measures of biodiversity, we used two different approaches of mathematical modelling and conducted an extensive meta-analysis. Two-thirds of the surveyed studies present different results for different diversity measures. Accordingly, the meta-analysis showed a narrow range of negative quadratic regression components for richness, but not evenness. Also, the two models support the IDH and the DEM, respectively, when biodiversity is measured as species richness, but predict evenness to increase with increasing disturbance, for all levels of productivity. Consequently, studies that use compound indices of diversity should present logical arguments, a priori, to why a specific index of diversity should peak in response to disturbance.
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On a collision course: competition and dispersal differences create no-analogue communities and cause extinctions during climate change
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Most climate change predictions omit species interactions and interspecific variation in dispersal. Here, we develop a model of multiple competing species along a warming climatic gradient that includes temperature- dependent competition, differences in niche breadth and interspecific differences in dispersal ability. Competition and dispersal differences decreased diversity and produced so-called ‘no-analogue’ commu- nities, defined as a novel combination of species that does not currently co-occur. Climate change altered community richness the most when species had narrow niches, when mean community-wide dispersal rates were low and when species differed in dispersal abilities. With high interspecific dispersal variance, the best dispersers tracked climate change, out-competed slower dispersers and caused their extinction. Overall, competition slowed the advance of colonists into newly suitable habitats, creating lags in climate tracking. We predict that climate change will most threaten communities of species that have narrow niches (e.g. tropics), vary in dispersal (most communities) and compete strongly. Current forecasts probably underestimate climate change impacts on biodiversity by neglecting competition and dispersal differences.
Keywords: climate change; competition; dispersal; community ecology; movement ecology; thermal performance breadth
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Life history predicts risk of species decline in a stochastic world
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Understanding what traits determine the extinction risk of species has been a long-standing challenge. Natural populations increasingly experience reductions in habitat and population size concurrent with increasing novel environmental variation owing to anthropogenic disturbance and climate change. Recent studies show that a species risk of decline towards extinction is often non-random across species with differ- ent life histories. We propose that species with life histories in which all stage-specific vital rates are more evenly important to population growth rate may be less likely to decline towards extinction under these pressures. To test our prediction, we modelled declines in population growth rates under simulated stochas- tic disturbance to the vital rates of 105 species taken from the literature. Populations with more equally important vital rates, determined using elasticity analysis, declined more slowly across a gradient of increas- ing simulated environmental variation. Furthermore, higher evenness of elasticity was significantly correlated with a reduced chance of listing as Threatened on the International Union for Conservation of Nature Red List. The relative importance of life-history traits of diverse species can help us infer how natural assemblages will be affected by novel anthropogenic and climatic disturbances.
Keywords: International Union for Conservation of Nature Red List; extinction; life history; stage-based; elasticity; stochasticity
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Future collapse: how optimistic should we be?
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1st paragraph: Prof. Kelly FRS is optimistic about the chances of avoiding a collapse, but sadly we find his arguments entirely unpersuasive. For example, have Malthus (or we) really been wrong about food security? Roughly 850 million people are seriously undernourished (lacking sufficient calories) today, and perhaps 2 billion are malnourished (lacking one or more essential nutrients) [1]. When Malthus lived, there were only about 1 billion people on the planet. We agree that there are many things that could be done to feed today’s population of 7.1 billion, or even perhaps over 9 billion in 2050. Many of them (e.g. limiting waste) have been discussed for 50 years with little sign of progress. We do not think any serious analyst doubts that, if it were equitably distributed, today’s food production could nourish everyone adequately. Equally, we know of no serious analyst who believes such distribution is likely in the future. The concern is that climate disruption combined with other problems with the agricultural system will make it impossible to feed an ever larger future population, even if equal distribution were achieved. That concern is reinforced by the recent observation that, even before the likely heavy impacts of climate disruption on agriculture appear, production is failing to keep pace with projected needs [2].
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Why a collapse of global civilization will be avoided: a comment on Ehrlich & Ehrlich
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1st paragraph: Ehrlich FRS & Ehrlich [1] claim that over-population, over-consumption and the future climate mean that ‘preventing a global collapse of civilization is perhaps the foremost challenge confronting humanity’. What is missing from the well- referenced perspective of the potential downsides for the future of humanity is any balancing assessment of the progress being made on these three chal- lenges (and the many others they cite by way of detail) that suggests that the problems are being dealt with in a way that will not require a major disruption to the human condition or society. Earlier dire predictions have been made in the same mode by Malthus FRS [2] on food security, Jevons FRS [3] on coal exhaustion, King FRS & Murray [4] on peak oil, and by many others. They have all been overcome by the exercise of human ingenuity just as the doom was being prophesied with the deployment of steam engines to greatly improve agricultural efficiency, and the discoveries of oil and of fracking oil and gas, respectively, for the three examples given. It is incumbent on those who would continue to predict gloom to learn from history and make a comprehen- sive review of human progress before coming to their conclusions. The problems as perceived today by Ehrlich FRS and Ehrlich will be similarly seen off by work in progress by scientists and engineers. My comment is intended to summarize and reference the potential upsides being produced by today’s human ingenuity, and I leave the reader to weigh the balance for the future, taking into account the lessons of recent history.
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Anthropogenic environments exert variable selection on cranial capacity in mammals
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It is thought that behaviourally flexible species will be able to cope with novel and rapidly changing environments associated with human activity. However, it is unclear whether such environments are selecting for increases in behavioural plasticity, and whether some species show more pronounced evolutionary changes in plasticity. To test whether anthropogenic environ- ments are selecting for increased behavioural plasticity within species, we measured variation in relative cranial capacity over time and space in 10 species of mammals. We predicted that urban populations would show greater cranial capacity than rural populations and that cranial capacity would increase over time in urban populations. Based on relevant theory, we also predicted that species capable of rapid population growth would show more pronounced evolutionary responses. We found that urban populations of two small mammal species had significantly greater cranial capacity than rural populations. In addition, species with higher fecundity showed more pronounced differentiation between urban and rural populations. Contrary to expectations, we found no increases in cranial capacity over time in urban populations—indeed, two species tended to have a decrease in cranial capacity over time in urban populations. Furthermore, rural populations of all insectivorous species measured showed significant increases in relative cranial capacity over time. Our results provide partial support for the hypothesis that urban environments select for increased behavioural plasticity, although this selection may be most pronounced early during the urban colonization process. Furthermore, these data also suggest that behavioural plasticity may be simultaneously favoured in rural environments, which are also changing because of human activity.
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